Notebooks
Filter
None
Sort
Last updated
Observable
Sign in
Hannah Verdonk
@hverdonk
Passionate about biology, computers, and the intersection of the two.
Filter
None
Sort
Published
22
1
PREI Evolutionary imputation validation:
Fork
Hannah Verdonk
May 9, 2022
SYNREV-Codon: Drosophila
Fork
Hannah Verdonk
Feb 8, 2024
Visualizing MSS model results for Drosophila genes
Fork
Hannah Verdonk
Apr 5, 2024
2
Visualizing MSS model results
Fork
Hannah Verdonk
Oct 4, 2023
MSS genetic algorithm performance
Hannah Verdonk
Nov 15, 2023
Covariatiates with codon bias for codons assigned to different rate classes
Hannah Verdonk
Oct 4, 2023
Visualizing MSS model results for Enterobacterales genes
Fork
Hannah Verdonk
Sep 19, 2023
Visualizing MSS model results for Enterobacteriaceae genes
Fork
Hannah Verdonk
Jun 17, 2023
Plotting MSS (amino-acid) GA model selection results
Fork
Hannah Verdonk
Aug 18, 2023
Make quick plots
Hannah Verdonk
Jul 14, 2023
Plotting MSS GA model selection results
Fork
Hannah Verdonk
Aug 18, 2023
GA performance on Drosophila pre- and post-GA update
Hannah Verdonk
Aug 23, 2023
BUSTED vs BUSTED-E
Fork
Hannah Verdonk
Oct 23, 2023
Dimensionality Reduction
Hannah Verdonk
Nov 2, 2023
Visualizing Enterobacteriaceae SYNREV model fits and rate distributions.
Fork
Hannah Verdonk
Jan 9, 2024
Enterobacteriaceae cluster comparison
Hannah Verdonk
Dec 4, 2023
Visualizing SYNREV model fits and rate distributions.
Fork
Hannah Verdonk
Apr 25, 2024
Factor analysis mean loadings
Fork
Hannah Verdonk
Jan 24, 2024
Visualizing SYNREV model fits and rate distributions for Drosophila subsets
Fork
Hannah Verdonk
Mar 25, 2024
1
MSS codon genetic algorithm performance
Fork
Hannah Verdonk
Sep 10, 2025
5
DRHIP result viewer
Fork
Hannah Verdonk
Jul 6
1
Dengue genotype-specific evolutionary analysis results
Fork
Hannah Verdonk
May 21
